FedMix: Mixed Supervised Federated Learning for Medical Image Segmentation

Jeffry Wicaksana, Zengqiang Yan*, Dong Zhang, Xijie Huang, Huimin Wu, Xin Yang, Kwang Ting Cheng

*Corresponding author for this work

Research output: Contribution to journalJournal Articlepeer-review

61 Citations (Scopus)

Abstract

The purpose of federated learning is to enable multiple clients to jointly train a machine learning model without sharing data. However, the existing methods for training an image segmentation model have been based on an unrealistic assumption that the training set for each local client is annotated in a similar fashion and thus follows the same image supervision level. To relax this assumption, in this work, we propose a label-agnostic unified federated learning framework, named FedMix, for medical image segmentation based on mixed image labels. In FedMix, each client updates the federated model by integrating and effectively making use of all available labeled data ranging from strong pixel-level labels, weak bounding box labels, to weakest image-level class labels. Based on these local models, we further propose an adaptive weight assignment procedure across local clients, where each client learns an aggregation weight during the global model update. Compared to the existing methods, FedMix not only breaks through the constraint of a single level of image supervision but also can dynamically adjust the aggregation weight of each local client, achieving rich yet discriminative feature representations. Experimental results on multiple publicly-available datasets validate that the proposed FedMix outperforms the state-of-the-art methods by a large margin. In addition, we demonstrate through experiments that FedMix is extendable to multi-class medical image segmentation and much more feasible in clinical scenarios. The code is available at: https://github.com/Jwicaksana/FedMix.

Original languageEnglish
Pages (from-to)1955-1968
Number of pages14
JournalIEEE Transactions on Medical Imaging
Volume42
Issue number7
DOIs
Publication statusPublished - 1 Jul 2023

Bibliographical note

Publisher Copyright:
© 1982-2012 IEEE.

Keywords

  • Federated learning
  • adaptive weight aggregation
  • medical image segmentation
  • mixed supervision
  • pseudo labeling

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