Predicting spike trains from PMd to M1 using discrete time rescaling targeted GLM

Dong Xing, Cunle Qian, Hongbao Li, Shaomin Zhang, Qiaosheng Zhang, Yaoyao Hao, Xiaoxiang Zheng, Zhaohui Wu, Yiwen Wang, Gang Pan*

*Corresponding author for this work

Research output: Contribution to journalJournal Articlepeer-review

6 Citations (Scopus)

Abstract

The computational model for spike train prediction with inputs from other related cerebral cortices is important in revealing the underlying connection among different cortical areas. To evaluate goodness-of-fit of the model, the time rescaling Kolmogorov-Smirnov (KS) statistic is usually applied, of which the calculation is separated from optimization procedure of the model. If the KS statistic could be embedded into objective function of the optimization procedure, precision of the firing probability series generated by the model would be increased directly. This paper presents a linear-nonlinear-Poisson cascade framework for prediction of spike trains, whose objective function is changed from maximizing log-likelihood of the spike trains to minimizing the penalization of discrete time rescaling KS statistic to eliminate the separation between optimization and evaluation of the model. We apply our model on the task of predicting firing probability of neurons from primary motor cortex with spike trains from dorsal premotor cortex as input, which are two cerebral cortices associated with movements planning and executing. The experimental results show that by introducing the goodness-of-fit metric into the objective function, results of the model will gain a significant improvement, which outperforms the state of the art.

Original languageEnglish
Pages (from-to)194-204
Number of pages11
JournalIEEE Transactions on Cognitive and Developmental Systems
Volume10
Issue number2
DOIs
Publication statusPublished - 1 Jun 2018

Bibliographical note

Publisher Copyright:
© 2016 IEEE.

Keywords

  • Dorsal premotor cortex (PMd)
  • Kolmogorov-Smirnov (KS) test
  • generalized linear model (GLM)
  • numerical gradient descent
  • primary motor cortex (M1)

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