Radiomics-based survival risk stratification of glioblastoma is associated with different genome alteration

Peng Fei Xu, Cong Li, Yin Sheng Chen, De Pei Li, Shao Yan Xi, Fu Rong Chen, Xin Li*, Zhong Ping Chen*

*Corresponding author for this work

Research output: Contribution to journalJournal Articlepeer-review

7 Citations (Scopus)

Abstract

Background: Glioblastoma (GBM) is a remarkable heterogeneous tumor with few non-invasive, repeatable, and cost-effective prognostic biomarkers reported. In this study, we aim to explore the association between radiomic features and prognosis and genomic alterations in GBM. Methods: A total of 180 GBM patients (training cohort: n = 119; validation cohort 1: n = 37; validation cohort 2: n = 24) were enrolled and underwent preoperative MRI scans. From the multiparametric (T1, T1-Gd, T2, and T2-FLAIR) MR images, the radscore was developed to predict overall survival (OS) in a multistep postprocessing workflow and validated in two external validation cohorts. The prognostic accuracy of the radscore was assessed with concordance index (C-index) and Brier scores. Furthermore, we used hierarchical clustering and enrichment analysis to explore the association between image features and genomic alterations. Results: The MRI-based radscore was significantly correlated with OS in the training cohort (C-index: 0.70), validation cohort 1 (C-index: 0.66), and validation cohort 2 (C-index: 0.74). Multivariate analysis revealed that the radscore was an independent prognostic factor. Cluster analysis and enrichment analysis revealed that two distinct phenotypic clusters involved in distinct biological processes and pathways, including the VEGFA−VEGFR2 signaling pathway (q-value = 0.033), JAK−STAT signaling pathway (q-value = 0.049), and regulation of MAPK cascade (q-value = 0.0015/0.025). Conclusions: Radiomic features and radiomics-derived radscores provided important phenotypic and prognostic information with great potential for risk stratification in GBM.

Original languageEnglish
Article number106878
JournalComputers in Biology and Medicine
Volume159
DOIs
Publication statusPublished - Jun 2023
Externally publishedYes

Bibliographical note

Publisher Copyright:
© 2023

Keywords

  • Glioblastoma
  • Magnetic resonance imaging
  • Prognosis
  • Radiomics
  • Unsupervised learning

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